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  5. Zm00001d016095_T001

Zm00001d016095_T001


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0024947 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0024947_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d016095_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d016095_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_27
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_92


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISM GOs from InterProScan
BP GO:0010052 guard cell differentiation ISM GOs from InterProScan
MF GO:0046983 protein dimerization activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011598 bHLH_dom Pfam 121 170
IPR036638 HLH_DNA-bd_sf Gene3D 111 184
IPR044283 FAMA/SPEECHLESS/MUTE PANTHER 83 392
IPR011598 bHLH_dom SMART 124 175
IPR011598 bHLH_dom ProSiteProfiles 118 169
IPR036638 HLH_DNA-bd_sf SUPERFAMILY 119 195
IPR011598 bHLH_dom Pfam 120 170
IPR036638 HLH_DNA-bd_sf SUPERFAMILY 119 195
IPR044283 FAMA/SPEECHLESS/MUTE PANTHER 1 392
IPR036638 HLH_DNA-bd_sf Gene3D 111 184
IPR011598 bHLH_dom SMART 124 175
IPR011598 bHLH_dom ProSiteProfiles 118 169

No CAZYmes available for this sequence

No external refs found!