Zm00001d016255_T001


Description : heat shock transcription factor C1


Gene families : OG_01_0004199 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004199_tree

Sequence : cds (download), rna (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d016255_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d016255_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_169
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_85


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISM GOs from InterProScan
BP GO:0006355 regulation of DNA-templated transcription ISM GOs from InterProScan
MF GO:0043565 sequence-specific DNA binding ISM GOs from InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Source Start Stop
IPR000232 HSF_DNA-bd ProSitePatterns 54 78
IPR027725 HSF_fam PANTHER 9 199
IPR000232 HSF_DNA-bd PRINTS 66 78
IPR000232 HSF_DNA-bd PRINTS 15 38
IPR000232 HSF_DNA-bd PRINTS 53 65
IPR036390 WH_DNA-bd_sf SUPERFAMILY 11 104
IPR000232 HSF_DNA-bd SMART 11 104
IPR036388 WH-like_DNA-bd_sf Gene3D 7 105
IPR000232 HSF_DNA-bd Pfam 15 104
IPR036388 WH-like_DNA-bd_sf Gene3D 7 105
IPR000232 HSF_DNA-bd Pfam 15 104
IPR000232 HSF_DNA-bd PRINTS 66 78
IPR000232 HSF_DNA-bd PRINTS 15 38
IPR000232 HSF_DNA-bd PRINTS 53 65
IPR000232 HSF_DNA-bd ProSitePatterns 54 78
IPR027725 HSF_fam PANTHER 11 210
IPR036390 WH_DNA-bd_sf SUPERFAMILY 11 104
IPR000232 HSF_DNA-bd SMART 11 104

No CAZYmes available for this sequence

No external refs found!