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  5. Zm00001d016602_T001

Zm00001d016602_T001


Description : RING/U-box superfamily protein


Gene families : OG_01_0005865 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005865_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d016602_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d016602_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_313
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_215


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001841 Znf_RING SMART 241 287
IPR017907 Znf_RING_CS ProSitePatterns 256 265
IPR039739 MAG2/RNF10 PANTHER 627 776
IPR013083 Znf_RING/FYVE/PHD Gene3D 233 342
IPR018957 Znf_C3HC4_RING-type Pfam 241 287
IPR001841 Znf_RING ProSiteProfiles 241 287
IPR017907 Znf_RING_CS ProSitePatterns 256 265
IPR001841 Znf_RING ProSiteProfiles 241 287
IPR018957 Znf_C3HC4_RING-type Pfam 241 287
IPR013083 Znf_RING/FYVE/PHD Gene3D 233 342
IPR001841 Znf_RING SMART 241 287
IPR039739 MAG2/RNF10 PANTHER 122 773

No CAZYmes available for this sequence

No external refs found!