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Description : Transducin/WD40 repeat-like superfamily protein
Gene families : OG_01_0003385 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003385_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d016653_T001 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d016653_T001 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_203 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_18 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR001680 | WD40_rpt | SMART | 310 | 350 |
| IPR001680 | WD40_rpt | SMART | 155 | 200 |
| IPR001680 | WD40_rpt | SMART | 203 | 241 |
| IPR001680 | WD40_rpt | SMART | 84 | 125 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 337 | 351 |
| IPR001680 | WD40_rpt | Pfam | 315 | 350 |
| IPR001680 | WD40_rpt | Pfam | 210 | 241 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 317 | 353 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 210 | 250 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 36 | 416 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 62 | 358 |
| IPR045159 | DCAF7-like | PANTHER | 30 | 416 |
| IPR001680 | WD40_rpt | SMART | 310 | 350 |
| IPR001680 | WD40_rpt | SMART | 155 | 200 |
| IPR001680 | WD40_rpt | SMART | 203 | 241 |
| IPR001680 | WD40_rpt | SMART | 84 | 125 |
| IPR045159 | DCAF7-like | PANTHER | 30 | 416 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 317 | 353 |
| IPR001680 | WD40_rpt | ProSiteProfiles | 210 | 250 |
| IPR019775 | WD40_repeat_CS | ProSitePatterns | 337 | 351 |
| IPR015943 | WD40/YVTN_repeat-like_dom_sf | Gene3D | 36 | 416 |
| IPR001680 | WD40_rpt | Pfam | 210 | 241 |
| IPR001680 | WD40_rpt | Pfam | 319 | 350 |
| IPR036322 | WD40_repeat_dom_sf | SUPERFAMILY | 62 | 358 |
No CAZYmes available for this sequence
| No external refs found! |