Zm00001d016898_T001

Description : Phototropic-responsive NPH3 family protein

Gene families : OG_01_0001526 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001526_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d016898_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d016898_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_144
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_150

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR027356	NPH3_dom	Pfam	261	568
IPR027356	NPH3_dom	ProSiteProfiles	261	592
IPR011333	SKP1/BTB/POZ_sf	Gene3D	40	161
IPR000210	BTB/POZ_dom	ProSiteProfiles	53	128
IPR011333	SKP1/BTB/POZ_sf	SUPERFAMILY	40	145
IPR043454	NPH3/RPT2-like	PANTHER	50	683
IPR011333	SKP1/BTB/POZ_sf	SUPERFAMILY	40	145
IPR000210	BTB/POZ_dom	ProSiteProfiles	53	128
IPR027356	NPH3_dom	ProSiteProfiles	261	592
IPR027356	NPH3_dom	Pfam	261	568
IPR043454	NPH3/RPT2-like	PANTHER	12	749
IPR011333	SKP1/BTB/POZ_sf	Gene3D	40	161

No CAZYmes available for this sequence

External Links

No external refs found!