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  5. Zm00001d017029_T001

Zm00001d017029_T001


Description : phosphoinositide binding


Gene families : OG_01_0010250 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010250_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d017029_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d017029_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_39
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_184


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011011 Znf_FYVE_PHD SUPERFAMILY 21 79
IPR000306 Znf_FYVE Pfam 21 75
IPR019734 TPR_repeat SMART 1032 1065
IPR019734 TPR_repeat SMART 318 351
IPR019734 TPR_repeat SMART 456 489
IPR019734 TPR_repeat SMART 665 698
IPR019734 TPR_repeat SMART 807 840
IPR019734 TPR_repeat SMART 535 568
IPR019734 TPR_repeat SMART 908 941
IPR017455 Znf_FYVE-rel ProSiteProfiles 19 78
IPR000306 Znf_FYVE SMART 13 79
IPR013083 Znf_RING/FYVE/PHD Gene3D 17 86
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 320 839
IPR013083 Znf_RING/FYVE/PHD Gene3D 17 86
IPR011011 Znf_FYVE_PHD SUPERFAMILY 21 79
IPR019734 TPR_repeat SMART 1032 1065
IPR019734 TPR_repeat SMART 318 351
IPR019734 TPR_repeat SMART 456 489
IPR019734 TPR_repeat SMART 665 698
IPR019734 TPR_repeat SMART 535 568
IPR019734 TPR_repeat SMART 807 840
IPR019734 TPR_repeat SMART 908 941
IPR000306 Znf_FYVE SMART 13 79
IPR017455 Znf_FYVE-rel ProSiteProfiles 19 78
IPR000306 Znf_FYVE Pfam 18 75
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 320 839

No CAZYmes available for this sequence

No external refs found!