Zm00001d017258_T010

Description : ATP citrate lyase (ACL) family protein

Gene families : OG_01_0005673 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005673_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d017258_T010
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d017258_T010
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_255
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_107

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006099	tricarboxylic acid cycle	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013650	ATP-grasp_succ-CoA_synth-type	Pfam	75	291
IPR016102	Succinyl-CoA_synth-like	Gene3D	329	429
IPR013815	ATP_grasp_subdomain_1	Gene3D	89	193
IPR016102	Succinyl-CoA_synth-like	SUPERFAMILY	328	448
IPR005809	Succ_CoA_ligase-like_bsu	PIRSF	425	452
IPR005809	Succ_CoA_ligase-like_bsu	PIRSF	70	435
IPR005811	SUCC_ACL_C	Pfam	351	429
IPR017866	Succ-CoA_synthase_bsu_CS	ProSitePatterns	346	370
IPR011761	ATP-grasp	ProSiteProfiles	77	316
IPR005809	Succ_CoA_ligase-like_bsu	PANTHER	16	427
IPR005809	Succ_CoA_ligase-like_bsu	PANTHER	74	426
IPR005809	Succ_CoA_ligase-like_bsu	PIRSF	425	452
IPR005809	Succ_CoA_ligase-like_bsu	PIRSF	70	435
IPR013650	ATP-grasp_succ-CoA_synth-type	Pfam	75	291
IPR005811	SUCC_ACL_C	Pfam	351	429
IPR016102	Succinyl-CoA_synth-like	SUPERFAMILY	328	448
IPR011761	ATP-grasp	ProSiteProfiles	77	316
IPR017866	Succ-CoA_synthase_bsu_CS	ProSitePatterns	346	370
IPR013815	ATP_grasp_subdomain_1	Gene3D	89	193
IPR016102	Succinyl-CoA_synth-like	Gene3D	329	429
IPR005809	Succ_CoA_ligase-like_bsu	PANTHER	427	449
IPR005809	Succ_CoA_ligase-like_bsu	PANTHER	1	34

No CAZYmes available for this sequence

External Links

No external refs found!