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  5. Zm00001d017377_T001

Zm00001d017377_T001


Description : expansin B3


Gene families : OG_01_0011984 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011984_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d017377_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d017377_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_149
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_17


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0019953 sexual reproduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR007118 Expan_Lol_pI PRINTS 58 76
IPR007118 Expan_Lol_pI PRINTS 210 224
IPR007118 Expan_Lol_pI PRINTS 249 263
IPR007118 Expan_Lol_pI PRINTS 152 168
IPR007118 Expan_Lol_pI PRINTS 81 99
IPR007118 Expan_Lol_pI PRINTS 40 55
IPR009009 RlpA-like_DPBB Pfam 79 146
IPR036908 RlpA-like_sf Gene3D 26 165
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 59 169
IPR036749 Expansin_CBD_sf Gene3D 166 268
IPR036908 RlpA-like_sf SUPERFAMILY 36 168
IPR007117 Expansin_CBD Pfam 171 252
IPR007117 Expansin_CBD ProSiteProfiles 182 263
IPR005795 LolPI PRINTS 173 188
IPR005795 LolPI PRINTS 189 204
IPR005795 LolPI PRINTS 79 90
IPR005795 LolPI PRINTS 119 134
IPR005795 LolPI PRINTS 239 256
IPR005795 LolPI PRINTS 141 156
IPR007112 Expansin/allergen_DPBB_dom SMART 77 159
IPR036749 Expansin_CBD_sf SUPERFAMILY 169 263
IPR036749 Expansin_CBD_sf Gene3D 166 268
IPR005795 LolPI PRINTS 173 188
IPR005795 LolPI PRINTS 189 204
IPR005795 LolPI PRINTS 79 90
IPR005795 LolPI PRINTS 119 134
IPR005795 LolPI PRINTS 239 256
IPR005795 LolPI PRINTS 141 156
IPR007112 Expansin/allergen_DPBB_dom SMART 77 159
IPR009009 RlpA-like_DPBB Pfam 79 146
IPR007117 Expansin_CBD Pfam 171 252
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 59 169
IPR036908 RlpA-like_sf SUPERFAMILY 36 168
IPR036749 Expansin_CBD_sf SUPERFAMILY 169 263
IPR007118 Expan_Lol_pI PRINTS 58 76
IPR007118 Expan_Lol_pI PRINTS 210 224
IPR007118 Expan_Lol_pI PRINTS 249 263
IPR007118 Expan_Lol_pI PRINTS 152 168
IPR007118 Expan_Lol_pI PRINTS 81 99
IPR007118 Expan_Lol_pI PRINTS 40 55
IPR036908 RlpA-like_sf Gene3D 26 165
IPR007117 Expansin_CBD ProSiteProfiles 182 263
HMM Family HMM Length Query Length e-Value Query Start Query End
CBM63 78 269 5.3e-05 173 245
No external refs found!