Zm00001d017539_T002

Description : mechanosensitive channel of small conductance-like 5

Gene families : OG_01_0001740 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001740_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d017539_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d017539_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_307
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_148

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	ISM	GOs from InterProScan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	ISM	GOs from InterProScan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR016688	MscS-like_plants/fungi	PANTHER	33	965
IPR023408	MscS_beta-dom_sf	Gene3D	792	841
IPR016688	MscS-like_plants/fungi	PIRSF	29	966
IPR010920	LSM_dom_sf	SUPERFAMILY	782	841
IPR006685	MscS_channel_2nd	Pfam	785	841
IPR016688	MscS-like_plants/fungi	PANTHER	6	965
IPR016688	MscS-like_plants/fungi	PIRSF	29	966
IPR023408	MscS_beta-dom_sf	Gene3D	792	841
IPR006685	MscS_channel_2nd	Pfam	732	907
IPR010920	LSM_dom_sf	SUPERFAMILY	782	841

No CAZYmes available for this sequence

External Links

No external refs found!