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  5. Zm00001d017733_T001

Zm00001d017733_T001


Description : expansin B2


Gene families : OG_01_0025329 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0025329_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d017733_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d017733_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_321
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_14


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0019953 sexual reproduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR007117 Expansin_CBD ProSiteProfiles 188 269
IPR036749 Expansin_CBD_sf Gene3D 172 270
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 70 176
IPR036749 Expansin_CBD_sf SUPERFAMILY 176 268
IPR036908 RlpA-like_sf SUPERFAMILY 41 174
IPR007117 Expansin_CBD Pfam 177 258
IPR005795 LolPI PRINTS 109 119
IPR005795 LolPI PRINTS 195 210
IPR005795 LolPI PRINTS 245 262
IPR005795 LolPI PRINTS 179 194
IPR005795 LolPI PRINTS 89 100
IPR005795 LolPI PRINTS 126 141
IPR005795 LolPI PRINTS 148 163
IPR005795 LolPI PRINTS 225 242
IPR007118 Expan_Lol_pI PRINTS 159 175
IPR007118 Expan_Lol_pI PRINTS 216 230
IPR007118 Expan_Lol_pI PRINTS 91 109
IPR007118 Expan_Lol_pI PRINTS 69 87
IPR007118 Expan_Lol_pI PRINTS 255 269
IPR007118 Expan_Lol_pI PRINTS 49 64
IPR009009 RlpA-like_DPBB Pfam 88 166
IPR007112 Expansin/allergen_DPBB_dom SMART 87 166
IPR036908 RlpA-like_sf Gene3D 32 171
IPR036749 Expansin_CBD_sf Gene3D 172 270
IPR007118 Expan_Lol_pI PRINTS 159 175
IPR007118 Expan_Lol_pI PRINTS 216 230
IPR007118 Expan_Lol_pI PRINTS 91 109
IPR007118 Expan_Lol_pI PRINTS 69 87
IPR007118 Expan_Lol_pI PRINTS 255 269
IPR007118 Expan_Lol_pI PRINTS 49 64
IPR036749 Expansin_CBD_sf SUPERFAMILY 176 268
IPR036908 RlpA-like_sf Gene3D 32 171
IPR009009 RlpA-like_DPBB Pfam 88 165
IPR007117 Expansin_CBD ProSiteProfiles 188 269
IPR036908 RlpA-like_sf SUPERFAMILY 41 174
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 70 176
IPR007117 Expansin_CBD Pfam 177 258
IPR005795 LolPI PRINTS 109 119
IPR005795 LolPI PRINTS 195 210
IPR005795 LolPI PRINTS 245 262
IPR005795 LolPI PRINTS 179 194
IPR005795 LolPI PRINTS 89 100
IPR005795 LolPI PRINTS 126 141
IPR005795 LolPI PRINTS 148 163
IPR005795 LolPI PRINTS 225 242
IPR007112 Expansin/allergen_DPBB_dom SMART 87 166

No CAZYmes available for this sequence

No external refs found!