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  5. Zm00001d017734_T001

Zm00001d017734_T001


Description : expansin B2


Gene families : OG_01_0025329 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0025329_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d017734_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d017734_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_321
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_293


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0019953 sexual reproduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036908 RlpA-like_sf SUPERFAMILY 229 362
IPR036749 Expansin_CBD_sf Gene3D 360 458
IPR036749 Expansin_CBD_sf Gene3D 87 177
IPR036908 RlpA-like_sf SUPERFAMILY 1 89
IPR036908 RlpA-like_sf Gene3D 1 86
IPR036908 RlpA-like_sf Gene3D 220 359
IPR036749 Expansin_CBD_sf SUPERFAMILY 364 456
IPR005795 LolPI PRINTS 433 450
IPR005795 LolPI PRINTS 297 307
IPR005795 LolPI PRINTS 277 288
IPR005795 LolPI PRINTS 367 382
IPR005795 LolPI PRINTS 383 398
IPR005795 LolPI PRINTS 413 430
IPR005795 LolPI PRINTS 314 329
IPR005795 LolPI PRINTS 336 351
IPR007118 Expan_Lol_pI PRINTS 237 252
IPR007118 Expan_Lol_pI PRINTS 443 457
IPR007118 Expan_Lol_pI PRINTS 279 297
IPR007118 Expan_Lol_pI PRINTS 404 418
IPR007118 Expan_Lol_pI PRINTS 257 275
IPR007118 Expan_Lol_pI PRINTS 347 363
IPR007112 Expansin/allergen_DPBB_dom SMART 2 81
IPR007112 Expansin/allergen_DPBB_dom SMART 275 354
IPR007117 Expansin_CBD Pfam 365 446
IPR007117 Expansin_CBD Pfam 92 173
IPR036749 Expansin_CBD_sf SUPERFAMILY 91 173
IPR007117 Expansin_CBD ProSiteProfiles 376 457
IPR009009 RlpA-like_DPBB Pfam 276 354
IPR009009 RlpA-like_DPBB Pfam 3 81
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 258 364
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 1 91
IPR007117 Expansin_CBD ProSiteProfiles 103 173
IPR036908 RlpA-like_sf SUPERFAMILY 229 362
IPR007117 Expansin_CBD Pfam 365 446
IPR007117 Expansin_CBD Pfam 92 173
IPR036749 Expansin_CBD_sf Gene3D 360 458
IPR036749 Expansin_CBD_sf Gene3D 87 177
IPR005795 LolPI PRINTS 433 450
IPR005795 LolPI PRINTS 297 307
IPR005795 LolPI PRINTS 277 288
IPR005795 LolPI PRINTS 367 382
IPR005795 LolPI PRINTS 383 398
IPR005795 LolPI PRINTS 413 430
IPR005795 LolPI PRINTS 314 329
IPR005795 LolPI PRINTS 336 351
IPR007117 Expansin_CBD ProSiteProfiles 103 173
IPR036908 RlpA-like_sf SUPERFAMILY 1 89
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 258 364
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 1 91
IPR007118 Expan_Lol_pI PRINTS 237 252
IPR007118 Expan_Lol_pI PRINTS 443 457
IPR007118 Expan_Lol_pI PRINTS 279 297
IPR007118 Expan_Lol_pI PRINTS 404 418
IPR007118 Expan_Lol_pI PRINTS 257 275
IPR007118 Expan_Lol_pI PRINTS 347 363
IPR036749 Expansin_CBD_sf SUPERFAMILY 364 456
IPR007117 Expansin_CBD ProSiteProfiles 376 457
IPR036908 RlpA-like_sf Gene3D 1 86
IPR036908 RlpA-like_sf Gene3D 220 359
IPR036749 Expansin_CBD_sf SUPERFAMILY 91 173
IPR007112 Expansin/allergen_DPBB_dom SMART 2 81
IPR007112 Expansin/allergen_DPBB_dom SMART 275 354
IPR009009 RlpA-like_DPBB Pfam 3 80
IPR009009 RlpA-like_DPBB Pfam 276 353

No CAZYmes available for this sequence

No external refs found!