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  5. Zm00001d017740_T001

Zm00001d017740_T001


Description : expansin B2


Gene families : OG_01_0025329 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0025329_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d017740_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d017740_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_332
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_31


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0019953 sexual reproduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR005795 LolPI PRINTS 178 193
IPR005795 LolPI PRINTS 228 245
IPR005795 LolPI PRINTS 92 102
IPR005795 LolPI PRINTS 162 177
IPR005795 LolPI PRINTS 208 225
IPR005795 LolPI PRINTS 72 83
IPR005795 LolPI PRINTS 131 146
IPR005795 LolPI PRINTS 109 124
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 53 159
IPR007118 Expan_Lol_pI PRINTS 238 252
IPR007118 Expan_Lol_pI PRINTS 52 70
IPR007118 Expan_Lol_pI PRINTS 199 213
IPR007118 Expan_Lol_pI PRINTS 32 47
IPR007118 Expan_Lol_pI PRINTS 74 92
IPR007118 Expan_Lol_pI PRINTS 142 158
IPR036908 RlpA-like_sf SUPERFAMILY 24 156
IPR036749 Expansin_CBD_sf Gene3D 157 253
IPR007112 Expansin/allergen_DPBB_dom SMART 70 149
IPR007117 Expansin_CBD Pfam 160 241
IPR036749 Expansin_CBD_sf SUPERFAMILY 159 251
IPR007117 Expansin_CBD ProSiteProfiles 171 252
IPR009009 RlpA-like_DPBB Pfam 71 149
IPR036908 RlpA-like_sf Gene3D 15 155
IPR009009 RlpA-like_DPBB Pfam 71 148
IPR036908 RlpA-like_sf SUPERFAMILY 24 156
IPR007117 Expansin_CBD ProSiteProfiles 171 252
IPR007112 Expansin/allergen_DPBB_dom SMART 70 149
IPR005795 LolPI PRINTS 178 193
IPR005795 LolPI PRINTS 228 245
IPR005795 LolPI PRINTS 92 102
IPR005795 LolPI PRINTS 162 177
IPR005795 LolPI PRINTS 208 225
IPR005795 LolPI PRINTS 72 83
IPR005795 LolPI PRINTS 131 146
IPR005795 LolPI PRINTS 109 124
IPR036908 RlpA-like_sf Gene3D 15 155
IPR007117 Expansin_CBD Pfam 160 241
IPR036749 Expansin_CBD_sf Gene3D 157 253
IPR007118 Expan_Lol_pI PRINTS 238 252
IPR007118 Expan_Lol_pI PRINTS 52 70
IPR007118 Expan_Lol_pI PRINTS 199 213
IPR007118 Expan_Lol_pI PRINTS 32 47
IPR007118 Expan_Lol_pI PRINTS 74 92
IPR007118 Expan_Lol_pI PRINTS 142 158
IPR036749 Expansin_CBD_sf SUPERFAMILY 159 251
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 53 159

No CAZYmes available for this sequence

No external refs found!