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Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG_01_0001669 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001669_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d017793_T001 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d017793_T001 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_5 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_101 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 422 | 656 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 298 | 401 |
| IPR019734 | TPR_repeat | SMART | 544 | 577 |
| IPR019734 | TPR_repeat | SMART | 251 | 284 |
| IPR019734 | TPR_repeat | SMART | 586 | 619 |
| IPR019734 | TPR_repeat | SMART | 628 | 661 |
| IPR019734 | TPR_repeat | SMART | 294 | 327 |
| IPR019734 | TPR_repeat | SMART | 503 | 536 |
| IPR019734 | TPR_repeat | SMART | 336 | 369 |
| IPR019734 | TPR_repeat | SMART | 418 | 451 |
| IPR019734 | TPR_repeat | SMART | 460 | 493 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 407 | 582 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 200 | 296 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 503 | 536 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 583 | 713 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 297 | 406 |
| IPR019734 | TPR_repeat | Pfam | 423 | 446 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 418 | 451 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 197 | 280 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 422 | 656 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 418 | 451 |
| IPR019734 | TPR_repeat | ProSiteProfiles | 503 | 536 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 583 | 713 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 297 | 406 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 200 | 296 |
| IPR019734 | TPR_repeat | SMART | 544 | 577 |
| IPR019734 | TPR_repeat | SMART | 251 | 284 |
| IPR019734 | TPR_repeat | SMART | 628 | 661 |
| IPR019734 | TPR_repeat | SMART | 586 | 619 |
| IPR019734 | TPR_repeat | SMART | 294 | 327 |
| IPR019734 | TPR_repeat | SMART | 336 | 369 |
| IPR019734 | TPR_repeat | SMART | 503 | 536 |
| IPR019734 | TPR_repeat | SMART | 418 | 451 |
| IPR019734 | TPR_repeat | SMART | 460 | 493 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 298 | 401 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 407 | 582 |
| IPR019734 | TPR_repeat | Pfam | 254 | 286 |
| IPR011990 | TPR-like_helical_dom_sf | SUPERFAMILY | 197 | 280 |
No CAZYmes available for this sequence
| No external refs found! |