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Description : nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding
Gene families : OG_01_0006304 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006304_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d017798_T002 | No neighbors in network |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d017798_T002 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_213 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0008168 | methyltransferase activity | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR040689 | SUVR5_Znf-C2H2_3rpt | Pfam | 927 | 1004 |
| IPR001214 | SET_dom | ProSiteProfiles | 1337 | 1470 |
| IPR013087 | Znf_C2H2_type | SMART | 980 | 1003 |
| IPR013087 | Znf_C2H2_type | SMART | 925 | 948 |
| IPR001214 | SET_dom | Pfam | 1348 | 1469 |
| IPR003616 | Post-SET_dom | ProSiteProfiles | 1481 | 1493 |
| IPR046341 | SET_dom_sf | SUPERFAMILY | 1209 | 1483 |
| IPR046341 | SET_dom_sf | Gene3D | 1211 | 1493 |
| IPR013087 | Znf_C2H2_type | ProSiteProfiles | 980 | 1008 |
| IPR001214 | SET_dom | SMART | 1337 | 1476 |
| IPR013087 | Znf_C2H2_type | ProSitePatterns | 982 | 1003 |
| IPR013087 | Znf_C2H2_type | ProSitePatterns | 927 | 948 |
| IPR013087 | Znf_C2H2_type | ProSitePatterns | 982 | 1003 |
| IPR013087 | Znf_C2H2_type | SMART | 980 | 1003 |
| IPR013087 | Znf_C2H2_type | SMART | 925 | 948 |
| IPR013087 | Znf_C2H2_type | ProSiteProfiles | 980 | 1008 |
| IPR001214 | SET_dom | Pfam | 1348 | 1469 |
| IPR013087 | Znf_C2H2_type | ProSitePatterns | 927 | 948 |
| IPR003616 | Post-SET_dom | ProSiteProfiles | 1481 | 1493 |
| IPR021721 | Znf_CCCH-type_TRM13 | Pfam | 601 | 629 |
| IPR001214 | SET_dom | SMART | 1337 | 1476 |
| IPR040689 | SUVR5_Znf-C2H2_3rpt | Pfam | 927 | 1004 |
| IPR001214 | SET_dom | ProSiteProfiles | 1337 | 1470 |
No CAZYmes available for this sequence
| No external refs found! |