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  5. Zm00001d018189_T001

Zm00001d018189_T001


Description : Coatomer, beta\' subunit


Gene families : OG_01_0002804 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002804_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d018189_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d018189_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_45
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_25


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
MF GO:0015098 molybdate ion transmembrane transporter activity ISM GOs from InterProScan
BP GO:0015689 molybdate ion transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 497 538
IPR020472 G-protein_beta_WD-40_rep PRINTS 516 530
IPR020472 G-protein_beta_WD-40_rep PRINTS 430 444
IPR020472 G-protein_beta_WD-40_rep PRINTS 474 488
IPR001680 WD40_rpt ProSiteProfiles 410 452
IPR036259 MFS_trans_sf SUPERFAMILY 151 358
IPR001680 WD40_rpt SMART 363 399
IPR001680 WD40_rpt SMART 490 529
IPR001680 WD40_rpt SMART 446 487
IPR001680 WD40_rpt SMART 403 443
IPR001680 WD40_rpt Pfam 449 487
IPR001680 WD40_rpt Pfam 492 528
IPR001680 WD40_rpt Pfam 405 443
IPR001680 WD40_rpt Pfam 376 399
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 370 552
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 361 560
IPR001680 WD40_rpt ProSiteProfiles 453 496
IPR008509 MOT2/MFSD5 Pfam 151 367
IPR008509 MOT2/MFSD5 Pfam 151 367
IPR001680 WD40_rpt ProSiteProfiles 410 452
IPR036259 MFS_trans_sf SUPERFAMILY 151 358
IPR020472 G-protein_beta_WD-40_rep PRINTS 516 530
IPR020472 G-protein_beta_WD-40_rep PRINTS 430 444
IPR020472 G-protein_beta_WD-40_rep PRINTS 474 488
IPR001680 WD40_rpt ProSiteProfiles 453 496
IPR001680 WD40_rpt SMART 363 399
IPR001680 WD40_rpt SMART 490 529
IPR001680 WD40_rpt SMART 446 487
IPR001680 WD40_rpt SMART 403 443
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 361 560
IPR001680 WD40_rpt ProSiteProfiles 497 538
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 370 552
IPR008509 MOT2/MFSD5 PANTHER 149 370
IPR001680 WD40_rpt Pfam 405 443
IPR001680 WD40_rpt Pfam 492 528
IPR001680 WD40_rpt Pfam 449 487
IPR001680 WD40_rpt Pfam 375 399

No CAZYmes available for this sequence

No external refs found!