Zm00001d018226_T005

No description available

Gene families : OG_01_0001882 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001882_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d018226_T005
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d018226_T005
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_224

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	953	1100
IPR011990	TPR-like_helical_dom_sf	Gene3D	263	612
IPR013633	NRDE-2	PANTHER	28	1146
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	286	397
IPR003107	HAT	SMART	272	304
IPR003107	HAT	SMART	814	854
IPR003107	HAT	SMART	351	383
IPR003107	HAT	SMART	1046	1080
IPR013633	NRDE-2	Pfam	277	673
IPR011990	TPR-like_helical_dom_sf	Gene3D	954	1141
IPR011990	TPR-like_helical_dom_sf	Gene3D	954	1141
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	953	1100
IPR011990	TPR-like_helical_dom_sf	Gene3D	263	612
IPR011990	TPR-like_helical_dom_sf	SUPERFAMILY	286	397
IPR013633	NRDE-2	Pfam	277	672
IPR003107	HAT	SMART	272	304
IPR003107	HAT	SMART	814	854
IPR003107	HAT	SMART	351	383
IPR003107	HAT	SMART	1046	1080
IPR013633	NRDE-2	PANTHER	29	1142

No CAZYmes available for this sequence

External Links

No external refs found!