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  5. Zm00001d018274_T003

Zm00001d018274_T003


Description : tRNA synthetase class I (I, L, M and V) family protein


Gene families : OG_01_0003274 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003274_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d018274_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d018274_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_192
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_193


Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding ISM GOs from InterProScan
MF GO:0000166 nucleotide binding ISM GOs from InterProScan
MF GO:0002161 aminoacyl-tRNA editing activity ISM GOs from InterProScan
MF GO:0004812 aminoacyl-tRNA ligase activity ISM GOs from InterProScan
MF GO:0004822 isoleucine-tRNA ligase activity ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006418 tRNA aminoacylation for protein translation ISM GOs from InterProScan
BP GO:0006428 isoleucyl-tRNA aminoacylation ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR014729 Rossmann-like_a/b/a_fold Gene3D 507 776
IPR023585 Ile-tRNA-ligase_type1 Hamap 68 1085
IPR002300 aa-tRNA-synth_Ia Pfam 270 774
IPR033708 Anticodon_Ile_BEm CDD 776 962
IPR014729 Rossmann-like_a/b/a_fold Gene3D 264 320
IPR002301 Ile-tRNA-ligase NCBIfam 269 982
IPR009008 Val/Leu/Ile-tRNA-synth_edit Gene3D 321 497
IPR010663 Znf_FPG/IleRS Pfam 1056 1081
IPR009008 Val/Leu/Ile-tRNA-synth_edit SUPERFAMILY 310 530
IPR001412 aa-tRNA-synth_I_CS ProSitePatterns 123 134
IPR014729 Rossmann-like_a/b/a_fold Gene3D 82 247
IPR009080 tRNAsynth_Ia_anticodon-bd SUPERFAMILY 788 1085
IPR002301 Ile-tRNA-ligase PRINTS 116 127
IPR002301 Ile-tRNA-ligase PRINTS 528 543
IPR002301 Ile-tRNA-ligase PRINTS 654 667
IPR002301 Ile-tRNA-ligase PRINTS 688 697
IPR013155 M/V/L/I-tRNA-synth_anticd-bd Pfam 820 983
IPR002300 aa-tRNA-synth_Ia Pfam 94 237
IPR014729 Rossmann-like_a/b/a_fold Gene3D 507 776
IPR002301 Ile-tRNA-ligase PRINTS 116 127
IPR002301 Ile-tRNA-ligase PRINTS 528 543
IPR002301 Ile-tRNA-ligase PRINTS 654 667
IPR002301 Ile-tRNA-ligase PRINTS 688 697
IPR001412 aa-tRNA-synth_I_CS ProSitePatterns 123 134
IPR014729 Rossmann-like_a/b/a_fold Gene3D 82 247
IPR010663 Znf_FPG/IleRS Pfam 1056 1081
IPR002300 aa-tRNA-synth_Ia Pfam 270 774
IPR002300 aa-tRNA-synth_Ia Pfam 94 237
IPR002301 Ile-tRNA-ligase TIGRFAM 269 982
IPR009080 tRNAsynth_Ia_anticodon-bd SUPERFAMILY 788 1085
IPR023585 Ile-tRNA-ligase_type1 Hamap 68 1085
IPR009008 Val/Leu/Ile-tRNA-synth_edit SUPERFAMILY 310 530
IPR013155 M/V/L/I-tRNA-synth_anticd-bd Pfam 820 984
IPR033708 Anticodon_Ile_BEm CDD 776 962
IPR009008 Val/Leu/Ile-tRNA-synth_edit Gene3D 321 497
IPR014729 Rossmann-like_a/b/a_fold Gene3D 264 320

No CAZYmes available for this sequence

No external refs found!