1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d018416_T001

Zm00001d018416_T001


Description : phytochrome interacting factor 3


Gene families : OG_01_0008491 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008491_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d018416_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d018416_T001 No neighbors in network
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_26


Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011598 bHLH_dom Pfam 77 124
IPR036638 HLH_DNA-bd_sf Gene3D 70 134
IPR036638 HLH_DNA-bd_sf SUPERFAMILY 71 131
IPR011598 bHLH_dom SMART 80 129
IPR011598 bHLH_dom ProSiteProfiles 74 123
IPR047265 PIF1-like_bHLH CDD 74 129
IPR031066 bHLH_ALC-like_plant PANTHER 41 263
IPR011598 bHLH_dom ProSiteProfiles 74 123
IPR036638 HLH_DNA-bd_sf SUPERFAMILY 71 131
IPR036638 HLH_DNA-bd_sf Gene3D 70 134
IPR011598 bHLH_dom SMART 80 129
IPR031066 bHLH_ALC-like_plant PANTHER 19 317
IPR011598 bHLH_dom Pfam 78 124

No CAZYmes available for this sequence

No external refs found!