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  5. Zm00001d018460_T003

Zm00001d018460_T003


Description : LEUNIG_homolog


Gene families : OG_01_0005399 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005399_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d018460_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d018460_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_289
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_122


Type GO Term Name Evidence Source
MF GO:0003714 transcription corepressor activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt Pfam 765 798
IPR001680 WD40_rpt Pfam 682 716
IPR001680 WD40_rpt Pfam 557 592
IPR001680 WD40_rpt Pfam 521 550
IPR001680 WD40_rpt Pfam 599 636
IPR001680 WD40_rpt ProSiteProfiles 685 725
IPR044716 LEUNIG-like PANTHER 357 799
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 512 799
IPR001680 WD40_rpt ProSiteProfiles 603 645
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 506 652
IPR001680 WD40_rpt ProSiteProfiles 560 592
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 653 799
IPR001680 WD40_rpt ProSiteProfiles 767 799
IPR001680 WD40_rpt SMART 639 675
IPR001680 WD40_rpt SMART 511 550
IPR001680 WD40_rpt SMART 719 758
IPR001680 WD40_rpt SMART 553 592
IPR001680 WD40_rpt SMART 760 799
IPR001680 WD40_rpt SMART 678 716
IPR001680 WD40_rpt SMART 596 636
IPR006594 LisH ProSiteProfiles 8 40
IPR006594 LisH Pfam 10 36
IPR001680 WD40_rpt ProSiteProfiles 767 799
IPR006594 LisH ProSiteProfiles 8 40
IPR006594 LisH Pfam 10 36
IPR001680 WD40_rpt Pfam 555 592
IPR001680 WD40_rpt Pfam 767 799
IPR001680 WD40_rpt Pfam 600 636
IPR001680 WD40_rpt Pfam 683 716
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 653 799
IPR044716 LEUNIG-like PANTHER 1 799
IPR001680 WD40_rpt ProSiteProfiles 685 725
IPR001680 WD40_rpt SMART 639 675
IPR001680 WD40_rpt SMART 511 550
IPR001680 WD40_rpt SMART 719 758
IPR001680 WD40_rpt SMART 553 592
IPR001680 WD40_rpt SMART 596 636
IPR001680 WD40_rpt SMART 678 716
IPR001680 WD40_rpt SMART 760 799
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 506 652
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 512 799
IPR001680 WD40_rpt ProSiteProfiles 603 645
IPR001680 WD40_rpt ProSiteProfiles 560 592

No CAZYmes available for this sequence

No external refs found!