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Description : SLOW GROWTH 1
Gene families : OG_01_0013902 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0013902_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d018490_T001 | No neighbors in network |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d018490_T001 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_275 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 268 | 298 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 421 | 574 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 235 | 369 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 403 | 437 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 51 | 234 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 136 | 160 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 271 | 298 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 299 | 333 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 404 | 450 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 299 | 346 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 161 | 209 |
| IPR002885 | Pentatricopeptide_rpt | NCBIfam | 164 | 198 |
| IPR002885 | Pentatricopeptide_rpt | NCBIfam | 301 | 335 |
| IPR002885 | Pentatricopeptide_rpt | NCBIfam | 271 | 301 |
| IPR002885 | Pentatricopeptide_rpt | NCBIfam | 440 | 475 |
| IPR002885 | Pentatricopeptide_rpt | NCBIfam | 406 | 438 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 162 | 196 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 403 | 437 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 406 | 438 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 271 | 301 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 301 | 335 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 164 | 198 |
| IPR002885 | Pentatricopeptide_rpt | TIGRFAM | 440 | 475 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 136 | 160 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 162 | 209 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 403 | 450 |
| IPR002885 | Pentatricopeptide_rpt | Pfam | 298 | 346 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 162 | 196 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 421 | 574 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 235 | 369 |
| IPR011990 | TPR-like_helical_dom_sf | Gene3D | 51 | 234 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 268 | 298 |
| IPR002885 | Pentatricopeptide_rpt | ProSiteProfiles | 299 | 333 |
No CAZYmes available for this sequence
| No external refs found! |