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  5. Zm00001d018694_T002

Zm00001d018694_T002


Description : TCP-1/cpn60 chaperonin family protein


Gene families : OG_01_0001791 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001791_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d018694_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d018694_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_114
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_152


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006457 protein folding ISM GOs from InterProScan
MF GO:0016887 ATP hydrolysis activity ISM GOs from InterProScan
MF GO:0051082 unfolded protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002194 Chaperonin_TCP-1_CS ProSitePatterns 66 82
IPR027410 TCP-1-like_intermed_sf Gene3D 150 425
IPR027409 GroEL-like_apical_dom_sf SUPERFAMILY 217 398
IPR017998 Chaperone_TCP-1 PRINTS 393 415
IPR017998 Chaperone_TCP-1 PRINTS 427 439
IPR017998 Chaperone_TCP-1 PRINTS 42 58
IPR017998 Chaperone_TCP-1 PRINTS 64 82
IPR017998 Chaperone_TCP-1 PRINTS 94 113
IPR002194 Chaperonin_TCP-1_CS ProSitePatterns 45 57
IPR027410 TCP-1-like_intermed_sf SUPERFAMILY 156 425
IPR027413 GROEL-like_equatorial_sf SUPERFAMILY 21 544
IPR002423 Cpn60/GroEL/TCP-1 Pfam 40 544
IPR027409 GroEL-like_apical_dom_sf Gene3D 222 389
IPR012718 Chap_CCT_epsi NCBIfam 3 545
IPR002194 Chaperonin_TCP-1_CS ProSitePatterns 94 102
IPR017998 Chaperone_TCP-1 PANTHER 18 544
IPR012718 Chap_CCT_epsi CDD 6 544
IPR027413 GROEL-like_equatorial_sf Gene3D 37 543
IPR027409 GroEL-like_apical_dom_sf SUPERFAMILY 217 398
IPR017998 Chaperone_TCP-1 PANTHER 5 545
IPR027410 TCP-1-like_intermed_sf SUPERFAMILY 156 425
IPR012718 Chap_CCT_epsi TIGRFAM 3 545
IPR027410 TCP-1-like_intermed_sf Gene3D 150 425
IPR002194 Chaperonin_TCP-1_CS ProSitePatterns 45 57
IPR027413 GROEL-like_equatorial_sf Gene3D 37 543
IPR027409 GroEL-like_apical_dom_sf Gene3D 222 389
IPR002194 Chaperonin_TCP-1_CS ProSitePatterns 94 102
IPR012718 Chap_CCT_epsi CDD 6 544
IPR017998 Chaperone_TCP-1 PRINTS 393 415
IPR017998 Chaperone_TCP-1 PRINTS 427 439
IPR017998 Chaperone_TCP-1 PRINTS 42 58
IPR017998 Chaperone_TCP-1 PRINTS 64 82
IPR017998 Chaperone_TCP-1 PRINTS 94 113
IPR027413 GROEL-like_equatorial_sf SUPERFAMILY 21 544
IPR002194 Chaperonin_TCP-1_CS ProSitePatterns 66 82
IPR002423 Cpn60/GroEL/TCP-1 Pfam 40 544

No CAZYmes available for this sequence

No external refs found!