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  5. Zm00001d018901_T002

Zm00001d018901_T002


Description : protein containing PDZ domain, a K-box domain, and a TPR region


Gene families : OG_01_0007147 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007147_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d018901_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d018901_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_176
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_12


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019734 TPR_repeat ProSiteProfiles 222 255
IPR036034 PDZ_sf SUPERFAMILY 88 140
IPR011990 TPR-like_helical_dom_sf Gene3D 212 339
IPR001478 PDZ ProSiteProfiles 102 142
IPR036034 PDZ_sf Gene3D 79 148
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 227 288
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 227 288
IPR001478 PDZ ProSiteProfiles 102 142
IPR019734 TPR_repeat ProSiteProfiles 222 255
IPR036034 PDZ_sf SUPERFAMILY 88 140
IPR036034 PDZ_sf Gene3D 79 148
IPR011990 TPR-like_helical_dom_sf Gene3D 212 339

No CAZYmes available for this sequence

No external refs found!