Zm00001d018977_T029

Description : methyltransferase 1

Gene families : OG_01_0001735 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001735_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d018977_T029
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d018977_T029
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_165
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_179

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003682	chromatin binding	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003886	DNA (cytosine-5-)-methyltransferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	GOs from InterProScan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006304	DNA modification	None	Extended
BP	GO:0006305	DNA alkylation	None	Extended
BP	GO:0006306	DNA methylation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	ISM	GOs from InterProScan
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
MF	GO:0009008	DNA-methyltransferase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0032776	DNA methylation on cytosine	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090116	C-5 methylation of cytosine	ISM	GOs from InterProScan
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR043151	BAH_sf	Gene3D	944	1149
IPR029063	SAM-dependent_MTases_sf	Gene3D	1150	1353
IPR043151	BAH_sf	Gene3D	762	943
IPR001525	C5_MeTfrase	PRINTS	1146	1162
IPR001525	C5_MeTfrase	PRINTS	1329	1342
IPR001525	C5_MeTfrase	PRINTS	1283	1297
IPR018117	C5_DNA_meth_AS	ProSitePatterns	1242	1254
IPR001025	BAH_dom	SMART	794	926
IPR001025	BAH_dom	SMART	963	1102
IPR001025	BAH_dom	Pfam	798	925
IPR001025	BAH_dom	Pfam	963	1102
IPR001525	C5_MeTfrase	ProSiteProfiles	1145	1579
IPR031303	C5_meth_CS	ProSitePatterns	1554	1572
IPR017198	DNMT1-like	PIRSF	53	353
IPR017198	DNMT1-like	PIRSF	435	728
IPR017198	DNMT1-like	PIRSF	941	1474
IPR017198	DNMT1-like	PIRSF	722	949
IPR017198	DNMT1-like	PIRSF	1468	1587
IPR001525	C5_MeTfrase	NCBIfam	1148	1571
IPR022702	Cytosine_MeTrfase1_RFD	Pfam	451	603
IPR022702	Cytosine_MeTrfase1_RFD	Pfam	156	291
IPR029063	SAM-dependent_MTases_sf	SUPERFAMILY	1147	1574
IPR001025	BAH_dom	ProSiteProfiles	977	1102
IPR001525	C5_MeTfrase	Pfam	1229	1573
IPR001525	C5_MeTfrase	Pfam	1146	1195
IPR001025	BAH_dom	ProSiteProfiles	794	926
IPR018117	C5_DNA_meth_AS	ProSitePatterns	1242	1254
IPR031303	C5_meth_CS	ProSitePatterns	1554	1572
IPR001025	BAH_dom	ProSiteProfiles	977	1102
IPR001025	BAH_dom	Pfam	798	925
IPR001025	BAH_dom	Pfam	963	1102
IPR001025	BAH_dom	ProSiteProfiles	794	926
IPR001525	C5_MeTfrase	Pfam	1147	1195
IPR001525	C5_MeTfrase	Pfam	1230	1573
IPR001025	BAH_dom	SMART	794	926
IPR001025	BAH_dom	SMART	963	1102
IPR001525	C5_MeTfrase	ProSiteProfiles	1145	1579
IPR029063	SAM-dependent_MTases_sf	SUPERFAMILY	1147	1574
IPR043151	BAH_sf	Gene3D	762	943
IPR001525	C5_MeTfrase	TIGRFAM	1148	1571
IPR022702	Cytosine_MeTrfase1_RFD	Pfam	156	290
IPR022702	Cytosine_MeTrfase1_RFD	Pfam	451	603
IPR001525	C5_MeTfrase	PRINTS	1146	1162
IPR001525	C5_MeTfrase	PRINTS	1329	1342
IPR001525	C5_MeTfrase	PRINTS	1283	1297
IPR043151	BAH_sf	Gene3D	944	1149
IPR017198	DNMT1-like	PIRSF	435	728
IPR017198	DNMT1-like	PIRSF	53	353
IPR017198	DNMT1-like	PIRSF	941	1474
IPR017198	DNMT1-like	PIRSF	722	949
IPR017198	DNMT1-like	PIRSF	1468	1587

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d018977_T029

Expression Profile

Co-expression Networks

Functional Annotation