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  5. Zm00001d019084_T002

Zm00001d019084_T002


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0002159 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002159_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d019084_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d019084_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_31
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_252


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000504 RRM_dom ProSiteProfiles 115 189
IPR000504 RRM_dom SMART 116 185
IPR000504 RRM_dom SMART 16 87
IPR000504 RRM_dom Pfam 117 183
IPR000504 RRM_dom Pfam 17 72
IPR035979 RBD_domain_sf SUPERFAMILY 12 114
IPR035979 RBD_domain_sf SUPERFAMILY 113 212
IPR000504 RRM_dom ProSiteProfiles 15 91
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 112 196
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 14 96
IPR000504 RRM_dom ProSiteProfiles 15 91
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 112 196
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 14 96
IPR000504 RRM_dom ProSiteProfiles 115 189
IPR000504 RRM_dom SMART 116 185
IPR000504 RRM_dom SMART 16 87
IPR035979 RBD_domain_sf SUPERFAMILY 113 212
IPR000504 RRM_dom Pfam 17 72
IPR000504 RRM_dom Pfam 117 183
IPR035979 RBD_domain_sf SUPERFAMILY 12 114

No CAZYmes available for this sequence

No external refs found!