Zm00001d019106_T002

Description : coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative

Gene families : OG_01_0000530 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000530_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d019106_T002
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d019106_T002
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_127
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_272

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	ISM	GOs from InterProScan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	ISM	GOs from InterProScan
CC	GO:0030117	membrane coat	ISM	GOs from InterProScan
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030126	COPI vesicle coat	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR037067	Coatomer_gsu_app_sf	Gene3D	615	748
IPR037067	Coatomer_gsu_app_sf	Gene3D	749	786
IPR032154	Coatomer_g_Cpla	Pfam	788	902
IPR013040	Coatomer_gsu_app_Ig-like_dom	Pfam	623	745
IPR016024	ARM-type_fold	SUPERFAMILY	34	540
IPR012295	TBP_dom_sf	Gene3D	787	903
IPR017106	Coatomer_gsu	PANTHER	1	902
IPR017106	Coatomer_gsu	PIRSF	8	903
IPR013041	Clathrin_app_Ig-like_sf	SUPERFAMILY	622	789
IPR011989	ARM-like	Gene3D	333	555
IPR002553	Clathrin/coatomer_adapt-like_N	Pfam	28	540
IPR009028	Coatomer/calthrin_app_sub_C	SUPERFAMILY	790	902
IPR011989	ARM-like	Gene3D	24	316
IPR011989	ARM-like	Gene3D	333	555
IPR037067	Coatomer_gsu_app_sf	Gene3D	615	748
IPR032154	Coatomer_g_Cpla	Pfam	788	902
IPR013040	Coatomer_gsu_app_Ig-like_dom	Pfam	623	745
IPR011989	ARM-like	Gene3D	24	316
IPR017106	Coatomer_gsu	PANTHER	1	905
IPR017106	Coatomer_gsu	PIRSF	8	903
IPR002553	Clathrin/coatomer_adapt-like_N	Pfam	31	540
IPR012295	TBP_dom_sf	Gene3D	787	903
IPR016024	ARM-type_fold	SUPERFAMILY	34	540
IPR013041	Clathrin_app_Ig-like_sf	SUPERFAMILY	622	789
IPR037067	Coatomer_gsu_app_sf	Gene3D	749	786
IPR009028	Coatomer/calthrin_app_sub_C	SUPERFAMILY	790	902

No CAZYmes available for this sequence

External Links

No external refs found!