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  5. Zm00001d019478_T001

Zm00001d019478_T001


Description : Chalcone and stilbene synthase family protein


Gene families : OG_01_0028356 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0028356_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d019478_T001 No neighbors in network
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d019478_T001
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_2


Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process ISM GOs from InterProScan
MF GO:0016746 acyltransferase activity ISM GOs from InterProScan
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011141 Polyketide_synthase_type-III PIRSF 10 409
IPR011141 Polyketide_synthase_type-III PANTHER 21 406
IPR016039 Thiolase-like Gene3D 2 241
IPR001099 Chalcone/stilbene_synt_N Pfam 19 235
IPR016039 Thiolase-like Gene3D 242 410
IPR012328 Chalcone/stilbene_synt_C Pfam 244 407
IPR016039 Thiolase-like SUPERFAMILY 20 238
IPR016039 Thiolase-like SUPERFAMILY 241 405
IPR016039 Thiolase-like SUPERFAMILY 20 238
IPR011141 Polyketide_synthase_type-III PANTHER 18 408
IPR016039 Thiolase-like SUPERFAMILY 241 405
IPR012328 Chalcone/stilbene_synt_C Pfam 244 407
IPR011141 Polyketide_synthase_type-III PIRSF 10 409
IPR001099 Chalcone/stilbene_synt_N Pfam 19 235
IPR016039 Thiolase-like Gene3D 242 410
IPR016039 Thiolase-like Gene3D 2 241

No CAZYmes available for this sequence

No external refs found!