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  5. Zm00001d019538_T002

Zm00001d019538_T002


Description : RNA-binding KH domain-containing protein


Gene families : OG_01_0023981 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0023981_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d019538_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d019538_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_293
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_90


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036612 KH_dom_type_1_sf SUPERFAMILY 297 384
IPR004088 KH_dom_type_1 Pfam 398 464
IPR004088 KH_dom_type_1 Pfam 308 356
IPR004088 KH_dom_type_1 Pfam 610 660
IPR036612 KH_dom_type_1_sf SUPERFAMILY 388 472
IPR036612 KH_dom_type_1_sf Gene3D 302 385
IPR036612 KH_dom_type_1_sf Gene3D 592 672
IPR036612 KH_dom_type_1_sf Gene3D 392 471
IPR004087 KH_dom SMART 304 377
IPR004087 KH_dom SMART 595 665
IPR004087 KH_dom SMART 394 469
IPR036612 KH_dom_type_1_sf SUPERFAMILY 597 665
IPR036612 KH_dom_type_1_sf Gene3D 302 385
IPR036612 KH_dom_type_1_sf SUPERFAMILY 388 472
IPR036612 KH_dom_type_1_sf Gene3D 592 672
IPR036612 KH_dom_type_1_sf Gene3D 392 471
IPR036612 KH_dom_type_1_sf SUPERFAMILY 297 384
IPR004088 KH_dom_type_1 Pfam 610 661
IPR004088 KH_dom_type_1 Pfam 398 464
IPR004088 KH_dom_type_1 Pfam 308 355
IPR036612 KH_dom_type_1_sf SUPERFAMILY 597 665
IPR004087 KH_dom SMART 304 377
IPR004087 KH_dom SMART 595 665
IPR004087 KH_dom SMART 394 469

No CAZYmes available for this sequence

No external refs found!