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  5. Zm00001d019881_T001

Zm00001d019881_T001


Description : auxin transport protein (BIG)


Gene families : OG_01_0008775 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008775_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d019881_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d019881_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_141


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045189 UBR4-like PANTHER 25 4930
IPR000433 Znf_ZZ SMART 2430 2473
IPR000433 Znf_ZZ ProSitePatterns 2436 2463
IPR025704 E3_Ub_ligase_UBR4_C Pfam 4003 4907
IPR043145 Znf_ZZ_sf Gene3D 2427 2490
IPR000433 Znf_ZZ Pfam 2433 2465
IPR003126 Znf_UBR SMART 1395 1467
IPR003126 Znf_UBR ProSiteProfiles 1395 1466
IPR000433 Znf_ZZ ProSiteProfiles 2431 2490
IPR016024 ARM-type_fold SUPERFAMILY 3755 4267
IPR000433 Znf_ZZ ProSitePatterns 2436 2463
IPR045189 UBR4-like PANTHER 66 4927
IPR000433 Znf_ZZ ProSiteProfiles 2430 2464
IPR000433 Znf_ZZ SMART 2430 2473
IPR003126 Znf_UBR ProSiteProfiles 1395 1466
IPR043145 Znf_ZZ_sf Gene3D 2427 2490
IPR025704 E3_Ub_ligase_UBR4_C Pfam 4003 4907
IPR000433 Znf_ZZ Pfam 2433 2465
IPR016024 ARM-type_fold SUPERFAMILY 3755 4267
IPR003126 Znf_UBR SMART 1395 1467

No CAZYmes available for this sequence

No external refs found!