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Description : trithorax-like protein 2
Gene families : OG_01_0004191 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004191_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d019907_T003 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d019907_T003 | |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11 | |
| Cluster | Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_105 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| CC | GO:0005634 | nucleus | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR001965 | Znf_PHD | SMART | 592 | 639 |
| IPR001965 | Znf_PHD | SMART | 704 | 770 |
| IPR011011 | Znf_FYVE_PHD | SUPERFAMILY | 583 | 657 |
| IPR003616 | Post-SET_dom | SMART | 1011 | 1027 |
| IPR003888 | FYrich_N | Pfam | 445 | 489 |
| IPR003888 | FYrich_N | ProSiteProfiles | 431 | 490 |
| IPR001214 | SET_dom | ProSiteProfiles | 887 | 1005 |
| IPR046341 | SET_dom_sf | SUPERFAMILY | 884 | 1024 |
| IPR003616 | Post-SET_dom | ProSiteProfiles | 1011 | 1027 |
| IPR041956 | ATX1/2_ePHD | CDD | 649 | 769 |
| IPR000313 | PWWP_dom | Pfam | 268 | 354 |
| IPR046341 | SET_dom_sf | Gene3D | 770 | 1045 |
| IPR013083 | Znf_RING/FYVE/PHD | Gene3D | 643 | 769 |
| IPR013083 | Znf_RING/FYVE/PHD | Gene3D | 581 | 642 |
| IPR000313 | PWWP_dom | ProSiteProfiles | 267 | 330 |
| IPR003889 | FYrich_C | ProSiteProfiles | 494 | 574 |
| IPR000313 | PWWP_dom | SMART | 265 | 328 |
| IPR003889 | FYrich_C | Pfam | 496 | 569 |
| IPR001214 | SET_dom | SMART | 887 | 1011 |
| IPR003889 | FYrich_C | SMART | 498 | 579 |
| IPR001214 | SET_dom | Pfam | 898 | 1004 |
| IPR034732 | EPHD | ProSiteProfiles | 646 | 770 |
| IPR042010 | ATX1/2_PHD | CDD | 593 | 638 |
| IPR003888 | FYrich_N | SMART | 446 | 490 |
| IPR019786 | Zinc_finger_PHD-type_CS | ProSitePatterns | 593 | 638 |
| IPR019787 | Znf_PHD-finger | ProSiteProfiles | 590 | 641 |
| IPR042010 | ATX1/2_PHD | CDD | 593 | 638 |
| IPR019786 | Zinc_finger_PHD-type_CS | ProSitePatterns | 593 | 638 |
| IPR000313 | PWWP_dom | SMART | 265 | 328 |
| IPR003888 | FYrich_N | SMART | 446 | 490 |
| IPR013083 | Znf_RING/FYVE/PHD | Gene3D | 643 | 769 |
| IPR003616 | Post-SET_dom | ProSiteProfiles | 1011 | 1027 |
| IPR001214 | SET_dom | Pfam | 898 | 1004 |
| IPR013083 | Znf_RING/FYVE/PHD | Gene3D | 581 | 642 |
| IPR019787 | Znf_PHD-finger | ProSiteProfiles | 590 | 641 |
| IPR001214 | SET_dom | SMART | 887 | 1011 |
| IPR003889 | FYrich_C | ProSiteProfiles | 494 | 574 |
| IPR034732 | EPHD | ProSiteProfiles | 646 | 770 |
| IPR011011 | Znf_FYVE_PHD | SUPERFAMILY | 583 | 657 |
| IPR003616 | Post-SET_dom | SMART | 1011 | 1027 |
| IPR000313 | PWWP_dom | ProSiteProfiles | 267 | 330 |
| IPR001965 | Znf_PHD | SMART | 592 | 639 |
| IPR001965 | Znf_PHD | SMART | 704 | 770 |
| IPR003889 | FYrich_C | SMART | 498 | 579 |
| IPR003889 | FYrich_C | Pfam | 496 | 570 |
| IPR041956 | ATX1/2_ePHD | CDD | 649 | 769 |
| IPR003888 | FYrich_N | ProSiteProfiles | 431 | 490 |
| IPR001214 | SET_dom | ProSiteProfiles | 887 | 1005 |
| IPR000313 | PWWP_dom | Pfam | 268 | 355 |
| IPR003888 | FYrich_N | Pfam | 445 | 487 |
No CAZYmes available for this sequence
| No external refs found! |