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  5. Zm00001d019966_T001

Zm00001d019966_T001


Description : ankyrin repeat family protein


Gene families : OG_01_0002313 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002313_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d019966_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d019966_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_85
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_113


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002110 Ankyrin_rpt SMART 145 176
IPR002110 Ankyrin_rpt SMART 77 107
IPR002110 Ankyrin_rpt SMART 111 141
IPR002110 Ankyrin_rpt SMART 267 296
IPR002110 Ankyrin_rpt SMART 177 206
IPR002110 Ankyrin_rpt SMART 234 263
IPR011990 TPR-like_helical_dom_sf Gene3D 361 441
IPR002110 Ankyrin_rpt ProSiteProfiles 77 99
IPR019734 TPR_repeat ProSiteProfiles 360 393
IPR036770 Ankyrin_rpt-contain_sf Gene3D 212 300
IPR036770 Ankyrin_rpt-contain_sf Gene3D 27 143
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 64 290
IPR002110 Ankyrin_rpt ProSiteProfiles 145 173
IPR002110 Ankyrin_rpt Pfam 79 122
IPR002110 Ankyrin_rpt ProSiteProfiles 234 266
IPR002110 Ankyrin_rpt ProSiteProfiles 177 209
IPR002110 Ankyrin_rpt ProSiteProfiles 111 144
IPR002110 Ankyrin_rpt PRINTS 193 207
IPR002110 Ankyrin_rpt PRINTS 146 161
IPR002110 Ankyrin_rpt Pfam 124 206
IPR002110 Ankyrin_rpt Pfam 217 288
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 363 426
IPR036770 Ankyrin_rpt-contain_sf Gene3D 144 211
IPR002110 Ankyrin_rpt ProSiteProfiles 234 266
IPR002110 Ankyrin_rpt ProSiteProfiles 145 173
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 363 426
IPR002110 Ankyrin_rpt ProSiteProfiles 177 209
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 64 290
IPR002110 Ankyrin_rpt Pfam 79 123
IPR002110 Ankyrin_rpt SMART 145 176
IPR002110 Ankyrin_rpt SMART 77 107
IPR002110 Ankyrin_rpt SMART 111 141
IPR002110 Ankyrin_rpt SMART 267 296
IPR002110 Ankyrin_rpt SMART 177 206
IPR002110 Ankyrin_rpt SMART 234 263
IPR036770 Ankyrin_rpt-contain_sf Gene3D 144 211
IPR002110 Ankyrin_rpt Pfam 127 206
IPR002110 Ankyrin_rpt Pfam 219 288
IPR002110 Ankyrin_rpt ProSiteProfiles 77 99
IPR036770 Ankyrin_rpt-contain_sf Gene3D 27 143
IPR011990 TPR-like_helical_dom_sf Gene3D 361 441
IPR019734 TPR_repeat ProSiteProfiles 360 393
IPR002110 Ankyrin_rpt PRINTS 193 207
IPR002110 Ankyrin_rpt PRINTS 146 161
IPR002110 Ankyrin_rpt ProSiteProfiles 111 144
IPR036770 Ankyrin_rpt-contain_sf Gene3D 212 300

No CAZYmes available for this sequence

No external refs found!