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  5. Zm00001d020038_T001

Zm00001d020038_T001


Description : histone-lysine N-methyltransferase ASHH3


Gene families : OG_01_0004153 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004153_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d020038_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d020038_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_289
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_173


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005634 nucleus ISM GOs from InterProScan
MF GO:0018024 obsolete histone lysine N-methyltransferase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR046341 SET_dom_sf SUPERFAMILY 50 248
IPR025787 Hist-Lys_N-MeTrfase_SET2_plant ProSiteProfiles 52 291
IPR003616 Post-SET_dom ProSiteProfiles 242 258
IPR003616 Post-SET_dom SMART 242 258
IPR001214 SET_dom Pfam 130 236
IPR046341 SET_dom_sf Gene3D 32 279
IPR006560 AWS_dom SMART 68 118
IPR001214 SET_dom SMART 119 242
IPR006560 AWS_dom ProSiteProfiles 68 117
IPR001214 SET_dom ProSiteProfiles 119 236
IPR003616 Post-SET_dom SMART 242 258
IPR003616 Post-SET_dom ProSiteProfiles 242 258
IPR001214 SET_dom Pfam 130 235
IPR001214 SET_dom SMART 119 242
IPR025787 Hist-Lys_N-MeTrfase_SET2_plant ProSiteProfiles 52 291
IPR006560 AWS_dom SMART 68 118
IPR001214 SET_dom ProSiteProfiles 119 236
IPR006560 AWS_dom ProSiteProfiles 68 117

No CAZYmes available for this sequence

No external refs found!