Zm00001d020046_T009

Description : sequence-specific DNA binding transcription factors;sequence-specific DNA binding

Gene families : OG_01_0004651 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004651_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d020046_T009	No neighbors in network
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d020046_T009
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_251

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0003682	chromatin binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001356	Homeobox_dom	CDD	14	76
IPR039276	SHH1/2	PANTHER	14	362
IPR032001	SAWADEE_dom	Pfam	135	261
IPR001356	Homeobox_dom	ProSiteProfiles	14	78
IPR009057	Homeobox-like_sf	SUPERFAMILY	14	77
IPR001356	Homeobox_dom	SMART	8	82
IPR009057	Homeobox-like_sf	SUPERFAMILY	14	77
IPR001356	Homeobox_dom	CDD	14	76
IPR032001	SAWADEE_dom	Pfam	135	261
IPR001356	Homeobox_dom	SMART	8	82
IPR001356	Homeobox_dom	ProSiteProfiles	14	78
IPR039276	SHH1/2	PANTHER	1	367

No CAZYmes available for this sequence

External Links

No external refs found!