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  5. Zm00001d020157_T011

Zm00001d020157_T011


Description : ubiquitin-specific protease 26


Gene families : OG_01_0003387 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003387_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d020157_T011
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d020157_T011
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_249


Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity ISM GOs from InterProScan
MF GO:0004843 cysteine-type deubiquitinase activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006511 ubiquitin-dependent protein catabolic process ISM GOs from InterProScan
BP GO:0016579 protein deubiquitination ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR033841 USP48 CDD 108 445
IPR035927 DUSP-like_sf Gene3D 489 589
IPR006615 Pept_C19_DUSP ProSiteProfiles 732 870
IPR006615 Pept_C19_DUSP SMART 515 593
IPR038765 Papain-like_cys_pep_sf SUPERFAMILY 105 468
IPR018200 USP_CS ProSitePatterns 108 123
IPR044743 Ubl_USP48 CDD 979 1075
IPR001394 Peptidase_C19_UCH Pfam 107 444
IPR028889 USP_dom ProSiteProfiles 107 447
IPR035927 DUSP-like_sf Gene3D 728 865
IPR029071 Ubiquitin-like_domsf SUPERFAMILY 976 1040
IPR006615 Pept_C19_DUSP Pfam 521 589
IPR035927 DUSP-like_sf SUPERFAMILY 502 589
IPR006615 Pept_C19_DUSP ProSiteProfiles 498 591
IPR000626 Ubiquitin-like_dom ProSiteProfiles 975 1037
IPR006615 Pept_C19_DUSP ProSiteProfiles 606 709
IPR018200 USP_CS ProSitePatterns 343 361
IPR018200 USP_CS ProSitePatterns 343 361
IPR006615 Pept_C19_DUSP ProSiteProfiles 498 591
IPR044743 Ubl_USP48 CDD 979 1075
IPR000626 Ubiquitin-like_dom ProSiteProfiles 975 1037
IPR029071 Ubiquitin-like_domsf SUPERFAMILY 976 1040
IPR006615 Pept_C19_DUSP ProSiteProfiles 606 709
IPR033841 USP48 CDD 108 445
IPR018200 USP_CS ProSitePatterns 108 123
IPR028889 USP_dom ProSiteProfiles 107 447
IPR006615 Pept_C19_DUSP SMART 515 593
IPR001394 Peptidase_C19_UCH Pfam 108 444
IPR038765 Papain-like_cys_pep_sf SUPERFAMILY 105 468
IPR035927 DUSP-like_sf Gene3D 728 865
IPR006615 Pept_C19_DUSP ProSiteProfiles 732 870
IPR035927 DUSP-like_sf SUPERFAMILY 502 589
IPR035927 DUSP-like_sf Gene3D 489 589

No CAZYmes available for this sequence

No external refs found!