1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001d020260_T001

Zm00001d020260_T001


Description : Cupredoxin superfamily protein


Gene families : OG_01_0001614 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001614_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d020260_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d020260_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_3
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_68


Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding ISM GOs from InterProScan
CC GO:0005576 extracellular region ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011706 Cu-oxidase_C Pfam 414 548
IPR017760 L-ascorbate_oxidase_pln NCBIfam 27 565
IPR045087 Cu-oxidase_fam PANTHER 26 543
IPR033138 Cu_oxidase_CS ProSitePatterns 525 545
IPR001117 Cu-oxidase_2nd Pfam 164 318
IPR008972 Cupredoxin Gene3D 156 353
IPR011707 Cu-oxidase-like_N Pfam 36 146
IPR008972 Cupredoxin Gene3D 359 567
IPR008972 Cupredoxin SUPERFAMILY 361 564
IPR008972 Cupredoxin SUPERFAMILY 155 351
IPR034267 CuRO_3_AAO CDD 364 556
IPR008972 Cupredoxin Gene3D 13 146
IPR008972 Cupredoxin SUPERFAMILY 21 173
IPR002355 Cu_oxidase_Cu_BS ProSitePatterns 530 541
IPR033138 Cu_oxidase_CS ProSitePatterns 525 545
IPR017760 L-ascorbate_oxidase_pln TIGRFAM 27 565
IPR008972 Cupredoxin SUPERFAMILY 155 351
IPR011706 Cu-oxidase_C Pfam 418 548
IPR011707 Cu-oxidase-like_N Pfam 37 146
IPR034267 CuRO_3_AAO CDD 364 556
IPR008972 Cupredoxin Gene3D 13 146
IPR001117 Cu-oxidase_2nd Pfam 164 318
IPR008972 Cupredoxin SUPERFAMILY 361 564
IPR008972 Cupredoxin Gene3D 156 353
IPR008972 Cupredoxin SUPERFAMILY 21 173
IPR002355 Cu_oxidase_Cu_BS ProSitePatterns 530 541
IPR045087 Cu-oxidase_fam PANTHER 4 565
IPR008972 Cupredoxin Gene3D 359 567
HMM Family HMM Length Query Length e-Value Query Start Query End
AA1 358 570 1.3e-116 43 541
No external refs found!