Zm00001d020342_T001

Description : Ribosomal protein S5/Elongation factor G/III/V family protein

Gene families : OG_01_0015586 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015586_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d020342_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d020342_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_38
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_68

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR005517	Transl_elong_EFG/EF2_IV	Pfam	214	326
IPR014721	Ribsml_uS5_D2-typ_fold_subgr	Gene3D	173	323
IPR000640	EFG_V-like	Pfam	328	397
IPR041095	EFG_II	Pfam	102	158
IPR000640	EFG_V-like	SMART	328	398
IPR035647	EFG_III/V	SUPERFAMILY	331	398
IPR035647	EFG_III/V	SUPERFAMILY	97	164
IPR005517	Transl_elong_EFG/EF2_IV	SMART	210	326
IPR020568	Ribosomal_Su5_D2-typ_SF	SUPERFAMILY	166	330
IPR000640	EFG_V-like	Pfam	328	397
IPR014721	Ribsml_uS5_D2-typ_fold_subgr	Gene3D	173	323
IPR005517	Transl_elong_EFG/EF2_IV	Pfam	214	326
IPR005517	Transl_elong_EFG/EF2_IV	SMART	210	326
IPR035647	EFG_III/V	SUPERFAMILY	331	398
IPR000640	EFG_V-like	SMART	328	398
IPR035647	EFG_III/V	SUPERFAMILY	97	164
IPR041095	EFG_II	Pfam	102	158
IPR020568	Ribosomal_Su5_D2-typ_SF	SUPERFAMILY	166	330

No CAZYmes available for this sequence

External Links

No external refs found!