Zm00001d020541_T003

No description available

Gene families : OG_01_0005321 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005321_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d020541_T003
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d020541_T003
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_317
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_90

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006400	tRNA modification	ISM	GOs from InterProScan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016763	pentosyltransferase activity	ISM	GOs from InterProScan
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002616	tRNA_ribo_trans-like	Pfam	48	134
IPR002616	tRNA_ribo_trans-like	Pfam	358	415
IPR002616	tRNA_ribo_trans-like	Pfam	168	357
IPR036511	TGT-like_sf	SUPERFAMILY	36	415
IPR036511	TGT-like_sf	Gene3D	35	418
IPR002616	tRNA_ribo_trans-like	NCBIfam	40	356
IPR002616	tRNA_ribo_trans-like	TIGRFAM	40	356
IPR002616	tRNA_ribo_trans-like	Pfam	359	415
IPR002616	tRNA_ribo_trans-like	Pfam	48	357
IPR036511	TGT-like_sf	Gene3D	35	418
IPR036511	TGT-like_sf	SUPERFAMILY	36	415

No CAZYmes available for this sequence

External Links

No external refs found!