Zm00001d020645_T001

Description : photosystem II reaction center protein G

Gene families : OG_01_0010912 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010912_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d020645_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d020645_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_197
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_56

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003954	NADH dehydrogenase activity	None	Extended
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0009055	electron transfer activity	None	Extended
CC	GO:0009521	photosystem	ISM	GOs from InterProScan
BP	GO:0009767	photosynthetic electron transport chain	ISM	GOs from InterProScan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	ISM	GOs from InterProScan
MF	GO:0016168	chlorophyll binding	ISM	GOs from InterProScan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	None	Extended
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	None	Extended
BP	GO:0019684	photosynthesis, light reaction	ISM	GOs from InterProScan
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0022900	electron transport chain	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
MF	GO:0048038	quinone binding	ISM	GOs from InterProScan
MF	GO:0050136	NADH dehydrogenase (quinone) activity	None	Extended
MF	GO:0051536	iron-sulfur cluster binding	ISM	GOs from InterProScan
MF	GO:0051539	4 iron, 4 sulfur cluster binding	ISM	GOs from InterProScan
MF	GO:0051540	metal cluster binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036001	PS_II_antenna-like_sf	SUPERFAMILY	69	109
IPR006137	NADH_UbQ_OxRdtase-like_20kDa	Pfam	2	68
IPR006138	NADH_UQ_OxRdtase_20Kd_su	ProSitePatterns	41	57
IPR000932	PS_antenna-like	Pfam	69	107
IPR000932	PS_antenna-like	Pfam	69	107
IPR006138	NADH_UQ_OxRdtase_20Kd_su	ProSitePatterns	41	57
IPR036001	PS_II_antenna-like_sf	SUPERFAMILY	69	109
IPR006137	NADH_UbQ_OxRdtase-like_20kDa	Pfam	3	68

No CAZYmes available for this sequence

External Links

No external refs found!

Zm00001d020645_T001

Expression Profile

Co-expression Networks

Functional Annotation