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  5. Zm00001d020765_T001

Zm00001d020765_T001


Description : D111/G-patch domain-containing protein


Gene families : OG_01_0014827 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014827_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d020765_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d020765_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_236
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_158


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
BP GO:0045292 mRNA cis splicing, via spliceosome ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR035979 RBD_domain_sf SUPERFAMILY 279 364
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 275 361
IPR000467 G_patch_dom ProSiteProfiles 210 256
IPR040052 RBM17 PIRSF 3 377
IPR000467 G_patch_dom Pfam 212 252
IPR034653 SPF45_RRM CDD 274 370
IPR000504 RRM_dom ProSiteProfiles 276 362
IPR000467 G_patch_dom SMART 208 254
IPR003954 RRM_dom_euk SMART 277 358
IPR040052 RBM17 PANTHER 80 372
IPR000467 G_patch_dom Pfam 213 252
IPR035979 RBD_domain_sf SUPERFAMILY 279 364
IPR000504 RRM_dom ProSiteProfiles 276 362
IPR040052 RBM17 PANTHER 1 372
IPR003954 RRM_dom_euk SMART 277 358
IPR000467 G_patch_dom ProSiteProfiles 210 256
IPR040052 RBM17 PIRSF 3 377
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 275 361
IPR000467 G_patch_dom SMART 208 254
IPR034653 SPF45_RRM CDD 274 370

No CAZYmes available for this sequence

No external refs found!