Zm00001d020978_T005

Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein

Gene families : OG_01_0005170 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005170_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d020978_T005
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d020978_T005
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_157
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_235

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	ISM	GOs from InterProScan
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR041677	DNA2/NAM7_AAA_11	Pfam	1454	1822
IPR047187	SF1_C_Upf1	CDD	1854	2054
IPR027417	P-loop_NTPase	Gene3D	1396	1851
IPR027417	P-loop_NTPase	Gene3D	1852	2066
IPR041679	DNA2/NAM7-like_C	Pfam	1830	2037
IPR045055	DNA2/NAM7-like	PANTHER	1067	2197
IPR027417	P-loop_NTPase	SUPERFAMILY	1452	2082
IPR041679	DNA2/NAM7-like_C	Pfam	1830	2037
IPR041679	DNA2/NAM7-like_C	CDD	1854	2054
IPR045055	DNA2/NAM7-like	PANTHER	227	2198
IPR045055	DNA2/NAM7-like	PANTHER	21	229
IPR041677	DNA2/NAM7_AAA_11	Pfam	1454	1822
IPR027417	P-loop_NTPase	SUPERFAMILY	1452	2082
IPR027417	P-loop_NTPase	Gene3D	1852	2066
IPR027417	P-loop_NTPase	Gene3D	1396	1851

No CAZYmes available for this sequence

External Links

No external refs found!