1. Home
  2. Species
  3. Setaria viridis
  4. Sequence
  5. Sevir.1G048100.1

Sevir.1G048100.1


Description : Regulator of chromosome condensation (RCC1) family protein


Gene families : OG_01_0006454 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006454_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G048100.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G048100.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_23
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_36


Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR009091 RCC1/BLIP-II SUPERFAMILY 74 249
IPR009091 RCC1/BLIP-II SUPERFAMILY 296 482
IPR000408 Reg_chr_condens ProSiteProfiles 75 126
IPR000408 Reg_chr_condens ProSiteProfiles 182 234
IPR000408 Reg_chr_condens ProSiteProfiles 434 485
IPR000408 Reg_chr_condens ProSitePatterns 113 123
IPR000408 Reg_chr_condens Pfam 75 123
IPR000408 Reg_chr_condens Pfam 434 482
IPR000408 Reg_chr_condens Pfam 127 178
IPR000408 Reg_chr_condens Pfam 385 430
IPR000408 Reg_chr_condens Pfam 181 231
IPR000408 Reg_chr_condens ProSiteProfiles 235 326
IPR009091 RCC1/BLIP-II Gene3D 285 485
IPR009091 RCC1/BLIP-II Gene3D 69 281
IPR000408 Reg_chr_condens ProSiteProfiles 384 433
IPR000408 Reg_chr_condens ProSiteProfiles 127 181
IPR000408 Reg_chr_condens PRINTS 429 450
IPR000408 Reg_chr_condens PRINTS 110 123
IPR000408 Reg_chr_condens PRINTS 221 237
IPR000408 Reg_chr_condens PRINTS 182 198
IPR000408 Reg_chr_condens PRINTS 237 251
IPR000408 Reg_chr_condens PRINTS 129 145
IPR000408 Reg_chr_condens PRINTS 76 92

No CAZYmes available for this sequence

No external refs found!