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  5. Zm00001d021280_T004

Zm00001d021280_T004


Description : glycosyl hydrolase 9B18


Gene families : OG_01_0019281 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0019281_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d021280_T004
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d021280_T004
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_118
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_4


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR018221 Glyco_hydro_9_His_AS ProSitePatterns 438 464
IPR012341 6hp_glycosidase-like_sf Gene3D 51 546
IPR008928 6-hairpin_glycosidase_sf SUPERFAMILY 43 540
IPR001701 Glyco_hydro_9 Pfam 55 535
IPR033126 Glyco_hydro_9_Asp/Glu_AS ProSitePatterns 511 529
IPR033126 Glyco_hydro_9_Asp/Glu_AS ProSitePatterns 511 529
IPR018221 Glyco_hydro_9_His_AS ProSitePatterns 438 464
IPR012341 6hp_glycosidase-like_sf Gene3D 51 546
IPR008928 6-hairpin_glycosidase_sf SUPERFAMILY 43 540
IPR001701 Glyco_hydro_9 Pfam 55 535
HMM Family HMM Length Query Length e-Value Query Start Query End
GH9 418 551 1.6e-132 54 536
No external refs found!