Zm00001d021425_T001

Description : senescence-associated E3 ubiquitin ligase 1

Gene families : OG_01_0018496 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0018496_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d021425_T001	No neighbors in network
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d021425_T001
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_49

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003613	Ubox_domain	Pfam	28	99
IPR011989	ARM-like	Gene3D	230	321
IPR011989	ARM-like	Gene3D	107	229
IPR013083	Znf_RING/FYVE/PHD	Gene3D	2	106
IPR016024	ARM-type_fold	SUPERFAMILY	102	751
IPR011989	ARM-like	Gene3D	573	800
IPR003613	Ubox_domain	SMART	27	95
IPR011989	ARM-like	Gene3D	322	557
IPR000225	Armadillo	SMART	262	302
IPR000225	Armadillo	SMART	135	175
IPR000225	Armadillo	SMART	669	710
IPR000225	Armadillo	SMART	176	217
IPR000225	Armadillo	SMART	343	388
IPR000225	Armadillo	SMART	397	437
IPR003613	Ubox_domain	ProSiteProfiles	23	102
IPR045210	RING-Ubox_PUB	CDD	26	82
IPR011989	ARM-like	Gene3D	573	800
IPR045210	RING-Ubox_PUB	CDD	28	74
IPR000225	Armadillo	SMART	262	302
IPR000225	Armadillo	SMART	135	175
IPR000225	Armadillo	SMART	669	710
IPR000225	Armadillo	SMART	176	217
IPR000225	Armadillo	SMART	343	388
IPR000225	Armadillo	SMART	397	437
IPR003613	Ubox_domain	Pfam	28	99
IPR016024	ARM-type_fold	SUPERFAMILY	102	751
IPR003613	Ubox_domain	SMART	27	95
IPR011989	ARM-like	Gene3D	322	557
IPR013083	Znf_RING/FYVE/PHD	Gene3D	2	106
IPR003613	Ubox_domain	ProSiteProfiles	23	102
IPR011989	ARM-like	Gene3D	107	229
IPR011989	ARM-like	Gene3D	230	321

No CAZYmes available for this sequence

External Links

No external refs found!