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  5. Zm00001d021528_T001

Zm00001d021528_T001


Description : TRAF-like superfamily protein


Gene families : OG_01_0002604 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002604_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d021528_T001
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d021528_T001
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_168
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_68


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008974 TRAF-like Gene3D 27 174
IPR008974 TRAF-like Gene3D 185 323
IPR002083 MATH/TRAF_dom ProSiteProfiles 194 316
IPR002083 MATH/TRAF_dom SMART 43 150
IPR002083 MATH/TRAF_dom SMART 196 297
IPR002083 MATH/TRAF_dom CDD 43 166
IPR002083 MATH/TRAF_dom Pfam 50 137
IPR002083 MATH/TRAF_dom Pfam 201 318
IPR002083 MATH/TRAF_dom ProSiteProfiles 41 168
IPR002083 MATH/TRAF_dom CDD 197 316
IPR002083 MATH/TRAF_dom ProSiteProfiles 194 316
IPR002083 MATH/TRAF_dom ProSiteProfiles 41 168
IPR002083 MATH/TRAF_dom CDD 43 166
IPR002083 MATH/TRAF_dom SMART 43 150
IPR002083 MATH/TRAF_dom SMART 196 297
IPR008974 TRAF-like Gene3D 27 174
IPR008974 TRAF-like Gene3D 185 323
IPR002083 MATH/TRAF_dom CDD 197 316
IPR002083 MATH/TRAF_dom Pfam 49 135
IPR002083 MATH/TRAF_dom Pfam 201 318

No CAZYmes available for this sequence

No external refs found!