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  5. Zm00001d021685_T022

Zm00001d021685_T022


Description : villin 4


Gene families : OG_01_0000277 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000277_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d021685_T022
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d021685_T022
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_83
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_176


Type GO Term Name Evidence Source
MF GO:0003779 actin binding ISM GOs from InterProScan
BP GO:0007010 cytoskeleton organization ISM GOs from InterProScan
MF GO:0051015 actin filament binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036886 Villin_headpiece_dom_sf SUPERFAMILY 767 841
IPR036886 Villin_headpiece_dom_sf Gene3D 779 841
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 132 238
IPR003128 Villin_headpiece SMART 806 841
IPR007123 Gelsolin-like_dom Pfam 523 594
IPR007123 Gelsolin-like_dom Pfam 33 100
IPR007123 Gelsolin-like_dom Pfam 152 221
IPR007123 Gelsolin-like_dom Pfam 289 365
IPR007122 Villin/Gelsolin PANTHER 2 835
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 403 496
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 497 621
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 10 131
IPR007122 Villin/Gelsolin PRINTS 321 339
IPR007122 Villin/Gelsolin PRINTS 529 551
IPR007122 Villin/Gelsolin PRINTS 207 228
IPR007122 Villin/Gelsolin PRINTS 296 312
IPR007122 Villin/Gelsolin PRINTS 477 496
IPR007122 Villin/Gelsolin PRINTS 354 374
IPR007122 Villin/Gelsolin PRINTS 417 437
IPR007122 Villin/Gelsolin SMART 136 228
IPR007122 Villin/Gelsolin SMART 21 118
IPR007122 Villin/Gelsolin SMART 402 491
IPR007122 Villin/Gelsolin SMART 277 374
IPR007122 Villin/Gelsolin SMART 508 604
IPR036180 Gelsolin-like_dom_sf SUPERFAMILY 132 312
IPR003128 Villin_headpiece Pfam 806 841
IPR003128 Villin_headpiece ProSiteProfiles 776 841
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 266 395
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 266 395
IPR007122 Villin/Gelsolin SMART 136 228
IPR007122 Villin/Gelsolin SMART 21 118
IPR007122 Villin/Gelsolin SMART 402 491
IPR007122 Villin/Gelsolin SMART 277 374
IPR007122 Villin/Gelsolin SMART 508 604
IPR036180 Gelsolin-like_dom_sf SUPERFAMILY 132 312
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 403 496
IPR007122 Villin/Gelsolin PANTHER 1 841
IPR036886 Villin_headpiece_dom_sf Gene3D 779 841
IPR003128 Villin_headpiece SMART 806 841
IPR003128 Villin_headpiece Pfam 806 841
IPR036886 Villin_headpiece_dom_sf SUPERFAMILY 767 841
IPR003128 Villin_headpiece ProSiteProfiles 776 841
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 132 238
IPR007122 Villin/Gelsolin PRINTS 321 339
IPR007122 Villin/Gelsolin PRINTS 529 551
IPR007122 Villin/Gelsolin PRINTS 207 228
IPR007122 Villin/Gelsolin PRINTS 296 312
IPR007122 Villin/Gelsolin PRINTS 477 496
IPR007122 Villin/Gelsolin PRINTS 354 374
IPR007122 Villin/Gelsolin PRINTS 417 437
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 10 131
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 497 621
IPR007123 Gelsolin-like_dom Pfam 289 367
IPR007123 Gelsolin-like_dom Pfam 152 220
IPR007123 Gelsolin-like_dom Pfam 34 100
IPR007123 Gelsolin-like_dom Pfam 523 594

No CAZYmes available for this sequence

No external refs found!