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Description : zinc finger (C2H2 type, AN1-like) family protein
Gene families : OG_01_0015263 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015263_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d021842_T001 | |
| Neighborhood | Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d021842_T001 | No neighbors in network |
| Cluster | Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_218 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR013087 | Znf_C2H2_type | ProSitePatterns | 226 | 247 |
| IPR000058 | Znf_AN1 | SMART | 101 | 142 |
| IPR000058 | Znf_AN1 | SMART | 13 | 52 |
| IPR035896 | AN1-like_Znf | SUPERFAMILY | 4 | 57 |
| IPR013087 | Znf_C2H2_type | ProSitePatterns | 263 | 284 |
| IPR035896 | AN1-like_Znf | Gene3D | 2 | 58 |
| IPR035896 | AN1-like_Znf | Gene3D | 86 | 172 |
| IPR000058 | Znf_AN1 | ProSiteProfiles | 95 | 145 |
| IPR013087 | Znf_C2H2_type | SMART | 224 | 247 |
| IPR013087 | Znf_C2H2_type | SMART | 261 | 284 |
| IPR000058 | Znf_AN1 | ProSiteProfiles | 7 | 55 |
| IPR013087 | Znf_C2H2_type | ProSiteProfiles | 261 | 289 |
| IPR035896 | AN1-like_Znf | SUPERFAMILY | 93 | 143 |
| IPR000058 | Znf_AN1 | Pfam | 101 | 140 |
| IPR000058 | Znf_AN1 | Pfam | 13 | 50 |
| IPR000058 | Znf_AN1 | SMART | 101 | 142 |
| IPR000058 | Znf_AN1 | SMART | 13 | 52 |
| IPR035896 | AN1-like_Znf | SUPERFAMILY | 4 | 57 |
| IPR035896 | AN1-like_Znf | SUPERFAMILY | 93 | 143 |
| IPR013087 | Znf_C2H2_type | ProSiteProfiles | 261 | 289 |
| IPR013087 | Znf_C2H2_type | ProSitePatterns | 226 | 247 |
| IPR000058 | Znf_AN1 | Pfam | 101 | 140 |
| IPR000058 | Znf_AN1 | Pfam | 13 | 50 |
| IPR013087 | Znf_C2H2_type | ProSitePatterns | 263 | 284 |
| IPR035896 | AN1-like_Znf | Gene3D | 2 | 58 |
| IPR035896 | AN1-like_Znf | Gene3D | 86 | 172 |
| IPR013087 | Znf_C2H2_type | SMART | 224 | 247 |
| IPR013087 | Znf_C2H2_type | SMART | 261 | 284 |
No CAZYmes available for this sequence
| No external refs found! |