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  5. Zm00001d021878_T003

Zm00001d021878_T003


Description : RING/FYVE/PHD zinc finger superfamily protein


Gene families : OG_01_0000473 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000473_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d021878_T003
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d021878_T003
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_292
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_18


Type GO Term Name Evidence Source
BP GO:0036258 multivesicular body assembly ISM GOs from InterProScan
MF GO:0043130 ubiquitin binding ISM GOs from InterProScan
MF GO:0046872 metal ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045893 FREE1 PANTHER 1 541
IPR000306 Znf_FYVE Pfam 392 456
IPR013083 Znf_RING/FYVE/PHD Gene3D 382 470
IPR017455 Znf_FYVE-rel ProSiteProfiles 396 456
IPR000306 Znf_FYVE SMART 388 457
IPR011011 Znf_FYVE_PHD SUPERFAMILY 391 463
IPR000306 Znf_FYVE SMART 388 457
IPR045893 FREE1 PANTHER 1 77
IPR045893 FREE1 PANTHER 78 542
IPR017455 Znf_FYVE-rel ProSiteProfiles 396 456
IPR000306 Znf_FYVE Pfam 392 456
IPR013083 Znf_RING/FYVE/PHD Gene3D 382 470
IPR011011 Znf_FYVE_PHD SUPERFAMILY 391 463

No CAZYmes available for this sequence

No external refs found!