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  5. Zm00001d022189_T002

Zm00001d022189_T002


Description : ortholog of human splicing factor SC35


Gene families : OG_01_0000399 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000399_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d022189_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d022189_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_146
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_224


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000504 RRM_dom ProSiteProfiles 17 95
IPR000504 RRM_dom SMART 18 91
IPR000504 RRM_dom Pfam 19 88
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 5 104
IPR035979 RBD_domain_sf SUPERFAMILY 4 104
IPR003954 RRM_dom_euk SMART 18 91
IPR000504 RRM_dom SMART 18 91
IPR035979 RBD_domain_sf SUPERFAMILY 4 104
IPR000504 RRM_dom Pfam 19 88
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 5 104
IPR003954 RRM_dom_euk SMART 18 91
IPR000504 RRM_dom ProSiteProfiles 17 95

No CAZYmes available for this sequence

No external refs found!