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  5. Zm00001d022198_T002

Zm00001d022198_T002


Description : SAP domain-containing protein


Gene families : OG_01_0003324 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003324_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d022198_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d022198_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_293
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_252


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR034257 Acinus_RRM CDD 504 588
IPR036361 SAP_dom_sf SUPERFAMILY 11 47
IPR036361 SAP_dom_sf Gene3D 12 50
IPR003034 SAP_dom ProSiteProfiles 12 46
IPR003034 SAP_dom SMART 12 46
IPR032552 RSB_motif Pfam 662 699
IPR003034 SAP_dom Pfam 13 42
IPR035979 RBD_domain_sf SUPERFAMILY 502 585
IPR003034 SAP_dom ProSiteProfiles 12 46
IPR034257 Acinus_RRM CDD 504 590
IPR003034 SAP_dom Pfam 14 42
IPR036361 SAP_dom_sf SUPERFAMILY 11 47
IPR003034 SAP_dom SMART 12 46
IPR032552 RSB_motif Pfam 662 699
IPR035979 RBD_domain_sf SUPERFAMILY 502 585
IPR036361 SAP_dom_sf Gene3D 12 50

No CAZYmes available for this sequence

No external refs found!