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  5. Zm00001d022205_T002

Zm00001d022205_T002


Description : related to KPC1


Gene families : OG_01_0004705 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004705_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d022205_T002
Neighborhood Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d022205_T002
Cluster Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_285
Cluster Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_58


Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR045737 RKP_N Pfam 1 140
IPR001841 Znf_RING ProSiteProfiles 1244 1282
IPR013320 ConA-like_dom_sf SUPERFAMILY 102 275
IPR043136 B30.2/SPRY_sf Gene3D 109 292
IPR003877 SPRY_dom Pfam 151 269
IPR045129 RNF123/RSPRY1-like PANTHER 10 1285
IPR013083 Znf_RING/FYVE/PHD Gene3D 1236 1290
IPR003877 SPRY_dom SMART 149 271
IPR001870 B30.2/SPRY ProSiteProfiles 81 272
IPR019474 Ub_conjug_fac_E4_core Pfam 794 979
IPR043136 B30.2/SPRY_sf Gene3D 109 292
IPR003877 SPRY_dom SMART 149 271
IPR001841 Znf_RING ProSiteProfiles 1244 1282
IPR045737 RKP_N Pfam 1 140
IPR003877 SPRY_dom Pfam 151 269
IPR013083 Znf_RING/FYVE/PHD Gene3D 1236 1290
IPR001870 B30.2/SPRY ProSiteProfiles 81 272
IPR045129 RNF123/RSPRY1-like PANTHER 43 1289
IPR013320 ConA-like_dom_sf SUPERFAMILY 102 275

No CAZYmes available for this sequence

No external refs found!