Zm00001d022228_T001

Description : ribonuclease 3

Gene families : OG_01_0011377 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0011377_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea mays coexpression network - v0.2 (X-meeting 2023): Zm00001d022228_T001
Neighborhood	Zea mays coexpression nextwork - Leiboff and Hake 2019: Zm00001d022228_T001
Cluster	Zea mays HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_175
Cluster	Zea mays HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_136

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	None	Extended
MF	GO:0004521	RNA endonuclease activity	None	Extended
MF	GO:0004540	RNA nuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016849	phosphorus-oxygen lyase activity	None	Extended
MF	GO:0033897	ribonuclease T2 activity	ISM	GOs from InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036430	RNase_T2-like_sf	SUPERFAMILY	21	257
IPR033697	Ribonuclease_T2_eukaryotic	CDD	25	252
IPR036430	RNase_T2-like_sf	Gene3D	19	259
IPR033130	RNase_T2_His_AS_2	ProSitePatterns	145	156
IPR001568	RNase_T2-like	Pfam	25	69
IPR001568	RNase_T2-like	Pfam	103	242
IPR018188	RNase_T2_His_AS_1	ProSitePatterns	58	65
IPR001568	RNase_T2-like	PANTHER	8	72
IPR036430	RNase_T2-like_sf	Gene3D	19	259
IPR036430	RNase_T2-like_sf	SUPERFAMILY	21	257
IPR033130	RNase_T2_His_AS_2	ProSitePatterns	145	156
IPR001568	RNase_T2-like	PANTHER	2	259
IPR033697	Ribonuclease_T2_eukaryotic	CDD	25	252
IPR001568	RNase_T2-like	Pfam	25	242
IPR018188	RNase_T2_His_AS_1	ProSitePatterns	58	65

No CAZYmes available for this sequence

External Links

No external refs found!